August 2015 Member Publications

August Publications: 119

Long-term challenges in congenital heart disease.

Bernstein D.

Curr Opin Pediatr. 2015 Aug 14.

Generation of iPSCs as a Pooled Culture Using Magnetic Activated Cell Sorting of Newly Reprogrammed Cells.

Yang W, Liu Y, Slovik KJ, Wu JC, Duncan SA, Rader DJ, Morrisey EE.

PLoS One. 2015 Aug 17;10(8):e0134995.

Ablating Atrial Fibrillation: Customizing Lesion Sets Guided by Rotor Mapping.

Zaman JA, Narayan SM.

Methodist Debakey Cardiovasc J. 2015 Apr-Jun;11(2):76-81.

Early surgical intervention or watchful waiting for the management of asymptomatic mitral regurgitation: a systematic review and meta-analysis.

Goldstone AB, Patrick WL, Cohen JE, Aribeana CN, Popat R, Woo YJ.

Ann Cardiothorac Surg. 2015 May;4(3):220-9.

Woo YJ.

Ann Cardiothorac Surg. 2015 May;4(3):219.

Novel TIA biomarkers identified by mass spectrometry-based proteomics.

George PM, Mlynash M, Adams CM, Kuo CJ, Albers GW, Olivot JM.

Int J Stroke. 2015 Aug 26.

Comparative outcomes of predominant facility-level use of ferumoxytol versus other intravenous iron formulations in incident hemodialysis patients.

Airy M, Mandayam S, Mitani AA, Chang TI, Ding VY, Brookhart MA, Goldstein BA, Winkelmayer WC.

Nephrol Dial Transplant. 2015 Aug 26.

Risk of Nonspine Fractures in Older Adults with Sarcopenia, Low Bone Mass, or Both.

Chalhoub D, Cawthon PM, Ensrud KE, Stefanick ML, Kado DM, Boudreau R, Greenspan S, Newman AB, Zmuda J, Orwoll ES, Cauley JA; Osteoporotic Fractures in Men Study Research Group.

J Am Geriatr Soc. 2015 Aug 27.

Blending Cr₂ O₃ into a NiO-Ni Electrocatalyst for Sustained Water Splitting.

Gong M, Zhou W, Kenney MJ, Kapusta R, Cowley S, Wu Y, Lu B, Lin MC, Wang DY, Yang J, Hwang BJ, Dai H.

Angew Chem Int Ed Engl. 2015 Aug 24.

Automating Identification of Multiple Chronic Conditions in Clinical Practice Guidelines.

Leung TI, Jalal H, Zulman DM, Dumontier M, Owens DK, Musen MA, Goldstein MK.

AMIA Jt Summits Transl Sci Proc. 2015 Mar 25;2015:456-60. eCollection 2015.

Data-Mining Electronic Medical Records for Clinical Order Recommendations: Wisdom of the Crowd or Tyranny of the Mob?

Chen JH, Altman RB.

AMIA Jt Summits Transl Sci Proc. 2015 Mar 25;2015:435-9. eCollection 2015.

Importance of Non-PV Triggers Ablation to Achieve Long Term Freedom from Paroxysmal Atrial Fibrillation in Patients With Low Ejection Fraction.

Zhao Y, Biase LD, Trivedi C, Mohanty S, Bai R, Mohanty P, Gianni C, Santangeli P, Horton R, Sanchez J, Gallinghouse GJ, Zagrodzky J, Hongo R, Beheiry S, Lakkireddy D, Reddy M, Hranitzky P, Al-Ahmad A, Elayi C, Burkhardt JD, Natale A.

Heart Rhythm. 2015 Aug 21. pii: S1547-5271(15)01119-4.

Microfluidic Single-Cell Analysis of Transplanted Human Induced Pluripotent Stem Cell-Derived Cardiomyocytes After Acute Myocardial Infarction.

Ong SG, Huber BC, Hee Lee W, Kodo K, Ebert AD, Ma Y, Nguyen PK, Diecke S, Chen WY, Wu JC.

Circulation. 2015 Aug 25;132(8):762-71.

My Journey as a Surgeon-Scientist Ten Years after Receiving the Inaugural Jacobson Promising Investigator Award.

Longaker MT.

J Am Coll Surg. 2015 Jul 11.

Genetic Control of Chromatin States in Humans Involves Local and Distal Chromosomal Interactions.

Grubert F, Zaugg JB, Kasowski M, Ursu O, Spacek DV, Martin AR, Greenside P, Srivas R, Phanstiel DH, Pekowska A, Heidari N, Euskirchen G, Huber W, Pritchard JK, Bustamante CD, Steinmetz LM, Kundaje A, Snyder M.

Cell. 2015 Aug 27;162(5):1051-65.

Hospital Accreditation and Bariatric Surgery: Is It Important?

Blondet JJ, Morton JM, Nguyen NT.

Adv Surg. 2015;49(1):123-9.

Comparison of quality-of-life measures after radial versus femoral artery access for cardiac catheterization in women: Results of the Study of Access Site for Enhancement of Percutaneous Coronary Intervention for Women quality-of-life substudy.

Hess CN, Krucoff MW, Sheng S, Anstrom KJ, Barham WB, Gilchrist IC, Harrington RA, Jacobs AK, Mehran R, Messenger JC, Mark DB, Rao SV.

Am Heart J. 2015 Aug;170(2):371-9.

A validated risk model for 1-year mortality after primary prevention implantable cardioverter defibrillator placement.

Heidenreich PA, Tsai V, Curtis J, Wang Y, Turakhia MP, Masoudi FA, Varosy PD, Goldstein MK.

Am Heart J. 2015 Aug;170(2):281-289.e2.

Integrative analysis of RNA, translation and protein levels reveals distinct regulatory variation across humans.

Cenik C, Sarinay Cenik E, Byeon GW, Grubert F, Candille SI, Spacek D, Alsallakh B, Tilgner H, Araya CL, Tang H, Ricci E, Snyder MP.

Genome Res. 2015 Aug 21.

Multiple Surface Regions on the Niemann-Pick C2 Protein Facilitate Intracellular Cholesterol Transport.

McCauliff LA, Xu Z, Li R, Kodukula S, Ko DC, Scott MP, Kahn PC, Storch J.

J Biol Chem. 2015 Aug 20.

Prognostic Value of Quantitative Diffusion-Weighted MRI in Patients with Traumatic Brain Injury.

Shakir A, Aksoy D, Mlynash M, Harris OA, Albers GW, Hirsch KG.

J Neuroimaging. 2015 Aug 22.

Adolescent (Mis)Perceptions About Nicotine Addiction: Results From a Mixed-Methods Study.

Roditis M, Lee J, Halpern-Felsher BL.

Health Educ Behav. 2015 Aug 20.

Human Engineered Heart Muscles Engraft and Survive Long-Term in a Rodent Myocardial Infarction Model.

Riegler J, Tiburcy M, Ebert A, Tzatzalos E, Raaz U, Abilez OJ, Shen Q, Kooreman NG, Neofytou E, Chen V, Wang M, Meyer T, Tsao PS, Connolly AJ, Couture LA, Gold JD, Zimmermann WH, Wu JC.

Circ Res. 2015 Aug 19.

Aortic Wall Injury Related to Endovascular Therapy for Aortic Coarctation.

Tretter JT, Jones TK, McElhinney DB.

Circ Cardiovasc Interv. 2015 Sep;8(9).

Dipeptide species regulate p38MAPK-Smad3 signalling to maintain chronic myelogenous leukaemia stem cells.

Naka K, Jomen Y, Ishihara K, Kim J, Ishimoto T, Bae EJ, Mohney RP, Stirdivant SM, Oshima H, Oshima M, Kim DW, Nakauchi H, Takihara Y, Kato Y, Ooshima A, Kim SJ.

Nat Commun. 2015 Aug 20;6:8039.

Association between blood glucose variability and coronary plaque instability in patients with acute coronary syndromes.

Okada K, Hibi K, Gohbara M, Kataoka S, Takano K, Akiyama E, Matsuzawa Y, Saka K, Maejima N, Endo M, Iwahashi N, Tsukahara K, Kosuge M, Ebina T, Fitzgerald PJ, Honda Y, Umemura S, Kimura K.

Cardiovasc Diabetol. 2015 Aug 20;14:111.

Wnt Signaling and Its Contribution to Craniofacial Tissue Homeostasis.

Yin X, Li J, Salmon B, Huang L, Lim WH, Liu B, Hunter DJ, Ransom RC, Singh G, Gillette M, Zou S, Helms JA.

J Dent Res. 2015 Aug 18

Effect of Common Genetic Variants of Growth Arrest-Specific 6 Gene on Insulin Resistance, Obesity and Type 2 Diabetes in an Asian Population.

Hsieh CH, Chung RH, Lee WJ, Lin MW, Chuang LM, Quertermous T, Assimes T, Hung YJ, Yu YW.

PLoS One. 2015 Aug 18;10(8):e0135681.

Wirelessly powered, fully internal optogenetics for brain, spinal and peripheral circuits in mice.

Montgomery KL, Yeh AJ, Ho JS, Tsao V, Mohan Iyer S, Grosenick L, Ferenczi EA, Tanabe Y, Deisseroth K, Delp SL, Poon AS.

Nat Methods. 2015 Aug 17.

Assessment of vibration of effects due to model specification can demonstrate the instability of observational associations.

Patel CJ, Burford B, Ioannidis JP.

J Clin Epidemiol. 2015 Sep;68(9):1046-58.

Risk of cardiac disease and observations on lack of potential predictors by clinical history among children presenting for cardiac evaluation of mid-exertional syncope.

Miyake CY, Motonaga KS, Fischer-Colbrie ME, Chen L, Hanisch DG, Balise RR, Kim JJ, Dubin AM.

Cardiol Young. 2015 Aug 17:1-7.

Classifying individuals based on a densely captured sequence of vital signs: An example using repeated blood pressure measurements during hemodialysis treatment.

Goldstein BA, Chang TI, Winkelmayer WC.

J Biomed Inform. 2015 Aug 13.

RNA editing by ADAR1 prevents MDA5 sensing of endogenous dsRNA as nonself.

Liddicoat BJ, Piskol R, Chalk AM, Ramaswami G, Higuchi M, Hartner JC, Li JB, Seeburg PH, Walkley CR.

Science. 2015 Jul 23.

Probing High-density Functional Protein Microarrays to Detect Protein-protein Interactions.

Fasolo J, Im H, Snyder MP.

J Vis Exp. 2015 Aug 2;(102).

Injectable Hydrogels with In Situ Double Network Formation Enhance Retention of Transplanted Stem Cells.

Cai L, Dewi RE, Heilshorn SC.

Adv Funct Mater. 2015 Mar 4;25(9):1344-1351.

Quantitative precision of optical frequency domain imaging: direct comparison with frequency domain optical coherence tomography and intravascular ultrasound.

Kobayashi Y, Kitahara H, Tanaka S, Okada K, Kimura T, Ikeno F, Yock PG, Fitzgerald PJ, Honda Y.

Cardiovasc Interv Ther. 2015 Aug 14.

Why Optimal Medical Therapy Should Be a Universal Standard of Care.

Maron DJ, Boden WE.

J Am Coll Cardiol. 2015 Aug 18;66(7):774-6.

Achieving high-sensitivity for clinical applications using augmented exome sequencing.

Patwardhan A, Harris J, Leng N, Bartha G, Church DM, Luo S, Haudenschild C, Pratt M, Zook J, Salit M, Tirch J, Morra M, Chervitz S, Li M, Clark M, Garcia S, Chandratillake G, Kirk S, Ashley E, Snyder M, Altman R, Bustamante C, Butte AJ, West J, Chen R.

Genome Med. 2015 Jul 16;7(1):71.

Hcm1 integrates signals from Cdk1 and Calcineurin to control cell proliferation.

Arsenault HE, Roy J, Mapa CE, Cyert MS, Benanti JA.

Mol Biol Cell. 2015 Aug 12.

A Rapid, High-Quality, Cost-Effective, Comprehensive, and Expandable Targeted Next-Generation Sequencing Assay for Inherited Heart Diseases.

Wilson KD, Shen P, Fung E, Karakikes I, Zhang A, InanlooRahatloo K, Odegaard J, Sallam K, Davis RW, Lui G, Ashley E, Scharfe C, Wu JC.

Circ Res. 2015 Aug 11.

For whom the cells pull: Hydrogel and micropost devices for measuring traction forces.

Ribeiro AJ, Denisin AK, Wilson RE, Pruitt BL.

Methods. 2015 Aug 8.

The vulnerable right ventricle.

Reddy S, Bernstein D.

Curr Opin Pediatr. 2015 Aug 8.

Computational modeling and engineering in pediatric and congenital heart disease.

Marsden AL, Feinstein JA.

Curr Opin Pediatr. 2015 Aug 8.

Classification of Contextual Use of Left Ventricular Ejection Fraction Assessments.

Kim Y, Garvin J, Goldstein MK, Meystre SM.

Stud Health Technol Inform. 2015;216:599-603.

Chronic pacing and adverse outcomes after transcatheter aortic valve implantation.

Dizon JM, Nazif TM, Hess PL, Biviano A, Garan H, Douglas PS, Kapadia S, Babaliaros V, Herrmann HC, Szeto WY, Jilaihawi H, Fearon WF, Tuzcu EM, Pichard AD, Makkar R, Williams M, Hahn RT, Xu K, Smith CR, Leon MB, Kodali SK; PARTNER Publications Office.

Heart. 2015 Aug 10.

Reply to van Oosten et al: "P-Wave Characteristics on Routine Preoperative Electrocardiogram Improve Prediction of New-Onset Postoperative Atrial Fibrillation in Cardiac Surgery".

Wong JK, Maxwell BG, Perez MV.

J Cardiothorac Vasc Anesth. 2015 Apr 16.

Response to Letter Regarding Article, "Long-Term Outcomes of Inoperable Patients With Aortic Stenosis Randomly Assigned to Transcatheter Aortic Valve Replacement or Standard Therapy".

Kapadia SR, Tuzcu EM, Makkar RR, Svensson LG, Agarwal S, Kodali S, Fontana GP, Webb JG, Mack M, Thourani VH, Babaliaros VC, Herrmann HC, Szeto WY, Pichard A, Williams MR, Anderson WN, Akin JJ, Miller DC, Smith CR, Leon MB.

Circulation. 2015 Aug 11;132(6):e118-9.

Collected World Experience About the Performance of the Snorkel/Chimney Endovascular Technique in the Treatment of Complex Aortic Pathologies: The PERICLES Registry.

Donas KP, Lee JT, Lachat M, Torsello G, Veith FJ; PERICLES investigators.

Ann Surg. 2015 Sep;262(3):546-53.

NLP based congestive heart failure case finding: A prospective analysis on statewide electronic medical records.

Wang Y, Luo J, Hao S, Xu H, Shin AY, Jin B, Liu R, Deng X, Wang L, Zheng L, Zhao Y, Zhu C, Hu Z, Fu C, Hao Y, Zhao Y, Jiang Y, Dai D, Culver DS, Alfreds ST, Todd R, Stearns F, Sylvester KG, Widen E, Ling XB.

Int J Med Inform. 2015 Jul 2. pii: S1386-5056(15)30013-7.

Maternal Asthma, Preterm Birth, and Risk of Bronchopulmonary Dysplasia.

Gage S, Kan P, Lee HC, Gould JB, Stevenson DK, Shaw GM, O'Brodovich HM.

J Pediatr. 2015 Aug 5.

A Rising Generation of Diversity in the Vascular Surgery Workforce.

Itoga NK, Woo K, Bismuth J, Bechara C, Grenon M, Mitchell E, Zhou W.

Ann Vasc Surg. 2015 Aug 4.

Comparison of variations detection between whole-genome amplification methods used in single-cell resequencing.

Hou Y, Wu K, Shi X, Li F, Song L, Wu H, Dean M, Li G, Tsang S, Jiang R, Zhang X, Li B, Liu G, Bedekar N, Lu N, Xie G, Liang H, Chang L, Wang T, Chen J, Li Y, Zhang X, Yang H, Xu X, Wang L, Wang J.

Gigascience. 2015 Aug 6;4:37.

Isogeometric Kirchhoff-Love shell formulations for biological membranes.

Tepole AB, Kabaria H, Bletzinger KU, Kuhl E.

Comput Methods Appl Mech Eng. 2015 Aug 15;293:328-347.

Group visits in the pediatric heart transplant outpatient clinic.

Hollander SA, McDonald N, Lee D, May LJ, Doan LN, Kaufman BD, Rosenthal DN.

Pediatr Transplant. 2015 Aug 6.

The central role of muscle stem cells in regenerative failure with aging.

Blau HM, Cosgrove BD, Ho AT.

Nat Med. 2015 Aug 6;21(8):854-62.

Invasive physiologic and anatomic multimodality assessment of myocardial bridging.

Schwartz JG, Tanaka S, Schnittger I, Tremmel JA.

Coron Artery Dis. 2015 Aug;26 Suppl 1:e38-40.

Assessment of left main artery stenosis with fractional flow reserve is affected by downstream stenosis in the left anterior descending artery.

Bing R, Yong AS, Fearon WF.

Coron Artery Dis. 2015 Aug;26 Suppl 1:e35-7.

The index of microcirculatory resistance in the physiologic assessment of the coronary microcirculation.

Martínez GJ, Yong AS, Fearon WF, Ng MK.

Coron Artery Dis. 2015 Aug;26 Suppl 1:e15-26.

Diketopyrrolopyrrole-Based Semiconducting Polymer Nanoparticles for In Vivo Photoacoustic Imaging.

Pu K, Mei J, Jokerst JV, Hong G, Antaris AL, Chattopadhyay N, Shuhendler AJ, Kurosawa T, Zhou Y, Gambhir SS, Bao Z, Rao J.

Adv Mater. 2015 Aug 6.

Structural insights into µ-opioid receptor activation.

Huang W, Manglik A, Venkatakrishnan AJ, Laeremans T, Feinberg EN, Sanborn AL, Kato HE, Livingston KE, Thorsen TS, Kling RC, Granier S, Gmeiner P, Husbands SM, Traynor JR, Weis WI, Steyaert J, Dror RO, Kobilka BK.

Nature. 2015 Aug 20;524(7565):315-21.

Propagation of conformational changes during μ-opioid receptor activation.

Sounier R, Mas C, Steyaert J, Laeremans T, Manglik A, Huang W, Kobilka BK, Déméné H, Granier S.

Nature. 2015 Aug 20;524(7565):375-8.

Celecoxib Nanoparticles for Therapeutic Angiogenesis.

Margulis K, Neofytou EA, Beygui RE, Zare RN.

ACS Nano. 2015 Aug 10.

Association of an Endovascular-First Protocol for Ruptured Abdominal Aortic Aneurysms With Survival and Discharge Disposition.

Ullery BW, Tran K, Chandra V, Mell MW, Harris EJ, Dalman RL, Lee JT.

JAMA Surg. 2015 Aug 5.

Turning terminally differentiated skeletal muscle cells into regenerative progenitors.

Wang H, Lööf S, Borg P, Nader GA, Blau HM, Simon A.

Nat Commun. 2015 Aug 5;6:7916.

Tuberculosis control and economic recession: longitudinal study of data from 21 European countries, 1991-2012.

Reeves A, Basu S, McKee M, Sandgren A, Stuckler D, Semenza JC.

Bull World Health Organ. 2015 Jun 1;93(6):369-79.

Harmonic force spectroscopy measures load-dependent kinetics of individual human β-cardiac myosin molecules.

Sung J, Nag S, Mortensen KI, Vestergaard CL, Sutton S, Ruppel K, Flyvbjerg H, Spudich JA.

Nat Commun. 2015 Aug 4;6:7931.

Appropriate patient selection or health care rationing? Lessons from surgical aortic valve replacement in the Placement of Aortic Transcatheter Valves I trial.

Szeto WY, Svensson LG, Rajeswaran J, Ehrlinger J, Suri RM, Smith CR, Mack M, Miller DC, McCarthy PM, Bavaria JE, Cohn LH, Corso PJ, Guyton RA, Thourani VH, Lytle BW, Williams MR, Webb JG, Kapadia S, Tuzcu EM, Cohen DJ, Schaff HV, Leon MB, Blackstone EH; Placement of Aortic Transcatheter Valves Trial Investigators.

J Thorac Cardiovasc Surg. 2015 Sep;150(3):557-568.e11.

Performance characterization of compressed sensing positron emission tomography detectors and data acquisition system.

Chang CM, Grant AM, Lee BJ, Kim E, Hong K, Levin CS.

Phys Med Biol. 2015 Aug 21;60(16):6407-21.

A coding variant in RARG confers susceptibility to anthracycline-induced cardiotoxicity in childhood cancer.

Aminkeng F, Bhavsar AP, Visscher H, Rassekh SR, Li Y, Lee JW, Brunham LR, Caron HN, van Dalen EC, Kremer LC, van der Pal HJ, Amstutz U, Rieder MJ, Bernstein D, Carleton BC, Hayden MR, Ross CJ; Canadian Pharmacogenomics Network for Drug Safety Consortium.

Nat Genet. 2015 Sep;47(9):1079-84.

Quantifying demographic and socioeconomic transitions for computational epidemiology: an open-source modeling approach applied to India.

Basu S, Goldhaber-Fiebert JD.

Popul Health Metr. 2015 Aug 1;13:19.

The long-term prognostic value of the Q wave criteria for prior myocardial infarction recommended in the universal definition of myocardial infarction.

Perino AC, Soofi M, Singh N, Aggarwal S, Froelicher V.

J Electrocardiol. 2015 Jul 7.

Patient Expectations and Perceptions of Goal-setting Strategies for Disease Management in Rheumatoid Arthritis.

Strand V, Wright GC, Bergman MJ, Tambiah J, Taylor PC.

J Rheumatol. 2015 Aug 1.

Practical dose point-based methods to characterize dose distribution in a stationary elliptical body phantom for a cone-beam C-arm CT system.

Choi JH, Constantin D, Ganguly A, Girard E, Morin RL, Dixon RL, Fahrig R.

Med Phys. 2015 Aug;42(8):4920.

Optical delay encoding for fast timing and detector signal multiplexing in PET.

Grant AM, Levin CS.

Med Phys. 2015 Aug;42(8):4526.

PIKfyve mediates the motility of late endosomes and lysosomes in neuronal dendrites.

Tsuruta F, Dolmetsch RE.

Neurosci Lett. 2015 Jul 29;605:18-23.

Pleiotropic effect of the proton pump inhibitor esomeprazole leading to suppression of lung inflammation and fibrosis.

Ghebremariam YT, Cooke JP, Gerhart W, Griego C, Brower JB, Doyle-Eisele M, Moeller BC, Zhou Q, Ho L, de Andrade J, Raghu G, Peterson L, Rivera A, Rosen GD.

J Transl Med. 2015 Aug 1;13:249.

First among Equals: Nerve Growth Factor in the Pathogenesis of Pulmonary Arterial Hypertension.

de Jesus Perez VA.

Am J Respir Crit Care Med. 2015 Aug 1;192(3):274-5.

Right Breast Mastectomy and Reconstruction with Tissue Expander under Thoracic Paravertebral Blocks in a 12-Week Parturient.

Webb CA, Weyker PD, Cohn S, Wheeler A, Lee J.

Case Rep Anesthesiol. 2015;2015:842725.

Changes in Risk Profile Over Time in the Population of a Pediatric Heart Transplant Program.

Reinhartz O, Maeda K, Reitz BA, Bernstein D, Luikart H, Rosenthal DN, Hollander SA.

Ann Thorac Surg. 2015 Jul 27. pii: S0003-4975(15)01007-3.

High Resolution Prediction of Calcium-Binding Sites in 3D Protein Structures Using FEATURE.

Zhou W, Tang GW, Altman RB.

J Chem Inf Model. 2015 Aug 24;55(8):1663-72.

Association Between Comorbidities and Outcomes in Heart Failure Patients With and Without an Implantable Cardioverter-Defibrillator for Primary Prevention.

Khazanie P, Hellkamp AS, Fonarow GC, Bhatt DL, Masoudi FA, Anstrom KJ, Heidenreich PA, Yancy CW, Curtis LH, Hernandez AF, Peterson ED, Al-Khatib SM.

J Am Heart Assoc. 2015 Aug 6;4(8).