CVI Member Publications

February 2010

CVI members (indicated in red) had 73 publications in February 2010:

1. Targeted contrast-enhanced ultrasound imaging of tumor angiogenesis with contrast microbubbles conjugated to integrin-binding knottin peptides.
  Willmann JK, Kimura RH, Deshpande N, Lutz AM, Cochran JR, Gambhir SS.
  J Nucl Med. 2010 Mar;51(3):433-40. Epub 2010 Feb 11.
  PMID: 20150258 [PubMed - in process]
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2. Utility of C-arm CT in patients with hepatocellular carcinoma undergoing transhepatic arterial chemoembolization.
  Tognolini A, Louie JD, Hwang GL, Hofmann LV, Sze DY, Kothary N.
  J Vasc Interv Radiol. 2010 Mar;21(3):339-47. Epub 2010 Feb 4.
  PMID: 20133156 [PubMed - in process]
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3. A nonviral minicircle vector for deriving human iPS cells.
  Jia F, Wilson KD, Sun N, Gupta DM, Huang M, Li Z, Panetta NJ, Chen ZY, Robbins RC, Kay MA, Longaker MT, Wu JC.
  Nat Methods. 2010 Mar;7(3):197-9. Epub 2010 Feb 7.
  PMID: 20139967 [PubMed - in process]
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4. Stimulus onset quenches neural variability: a widespread cortical phenomenon.
  Churchland MM, Yu BM, Cunningham JP, Sugrue LP, Cohen MR, Corrado GS, Newsome WT, Clark AM, Hosseini P, Scott BB, Bradley DC, Smith MA, Kohn A, Movshon JA, Armstrong KM, Moore T, Chang SW, Snyder LH, Lisberger SG, Priebe NJ, Finn IM, Ferster D, Ryu SI, Santhanam G, Sahani M, Shenoy KV.
  Nat Neurosci. 2010 Mar;13(3):369-78. Epub 2010 Feb 21.
  PMID: 20173745 [PubMed - in process]
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5. Search for Br( *) production in the D+DBr reaction.
  Zhang J, Jankunas J, Bartlett NC, Goldberg NT, Zare RN.
  J Chem Phys. 2010 Feb 28;132(8):084301.
  PMID: 20192296 [PubMed - in process]
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6. Phase I/II Trial of GN-BVC, a Gemcitabine and Vinorelbine-Containing Conditioning Regimen for Autologous Hematopoietic Cell Transplantation in Recurrent and Refractory Hodgkin Lymphoma.
  Arai S, Letsinger R, Wong RM, Johnston LJ, Laport GG, Lowsky R, Miklos DB, Judith AS, Weng WK, Lavori PW, Blume KG, Negrin RS, Horning SJ.
  Biol Blood Marrow Transplant. 2010 Feb 27. [Epub ahead of print]
  PMID: 20197102 [PubMed - as supplied by publisher]
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7. Direct conversion of fibroblasts to functional neurons by defined factors.
  Vierbuchen T, Ostermeier A, Pang ZP, Kokubu Y, Südhof TC, Wernig M.
  Nature. 2010 Feb 25;463(7284):1035-41. Epub 2010 Jan 27.
  PMID: 20107439 [PubMed - in process]
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8. Reprogramming towards pluripotency requires AID-dependent DNA demethylation.
  Bhutani N, Brady JJ, Damian M, Sacco A, Corbel SY, Blau HM.
  Nature. 2010 Feb 25;463(7284):1042-7.
  PMID: 20027182 [PubMed - in process]
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9. Civil-Military Collaboration in the Initial Medical Response to the Earthquake in Haiti.
  Auerbach PS, Norris RL, Menon AS, Brown IP, Kuah S, Schwieger J, Kinyon J, Helderman TN, Lawry L.
  N Engl J Med. 2010 Feb 24. [Epub ahead of print] No abstract available.
  PMID: 20181962 [PubMed - as supplied by publisher]
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10. Th17 and Th1 T-cell responses in giant cell arteritis.
  Deng J, Younge BR, Olshen RA, Goronzy JJ, Weyand CM.
  Circulation. 2010 Feb 23;121(7):906-15. Epub 2010 Feb 8.
  PMID: 20142449 [PubMed - in process]
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11. Upregulation of the apelin-APJ pathway promotes neointima formation in the carotid ligation model in mouse.
  Kojima Y, Kundu R, Cox CM, Leeper NJ, Anderson JA, Chun HJ, Ali ZA, Ashley EA, Krieg PA, Quertermous T.
  Cardiovasc Res. 2010 Feb 22. [Epub ahead of print]
  PMID: 20176814 [PubMed - as supplied by publisher]
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12. Measurement Precision in the Optimization of Cardiac Resynchronization Therapy.
  Turcott RG, Witteles RM, Wang PJ, Vagelos RH, Fowler MB, Ashley EA.
  Circ Heart Fail. 2010 Feb 22. [Epub ahead of print]
  PMID: 20176716 [PubMed - as supplied by publisher]
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13. Defining the Limits of Athlete's Heart. Implications for Screening in Diverse Populations.
  Sedehi D, Ashley EA.
  Circulation. 2010 Feb 22. [Epub ahead of print] No abstract available.
  PMID: 20176992 [PubMed - as supplied by publisher]
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14. Protein scaffold-based molecular probes for cancer molecular imaging.
  Miao Z, Levi J, Cheng Z.
  Amino Acids. 2010 Feb 21. [Epub ahead of print]
  PMID: 20174842 [PubMed - as supplied by publisher]
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15. A microfluidic oligonucleotide synthesizer.
  Lee CC, Snyder TM, Quake SR.
  Nucleic Acids Res. 2010 Feb 21. [Epub ahead of print]
  PMID: 20176572 [PubMed - as supplied by publisher]
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16. Cytochrome P450 2C9-CYP2C9.
  Van Booven D, Marsh S, McLeod H, Carrillo MW, Sangkuhl K, Klein TE, Altman RB.
  Pharmacogenet Genomics. 2010 Feb 20. [Epub ahead of print] No abstract available.
  PMID: 20150829 [PubMed - as supplied by publisher]
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17. Development of near-infrared fluorophore (NIRF)-labeled activity-based probes for in vivo imaging of legumain.
  Lee J, Bogyo M.
  ACS Chem Biol. 2010 Feb 19;5(2):233-43.
  PMID: 20017516 [PubMed - in process]
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18. Removal of Toxoplasma gondii Cysts from the Brain by Perforin-Mediated Activity of CD8+ T Cells.
  Suzuki Y, Wang X, Jortner BS, Payne L, Ni Y, Michie SA, Xu B, Kudo T, Perkins S.
  Am J Pathol. 2010 Feb 18. [Epub ahead of print]
  PMID: 20167872 [PubMed - as supplied by publisher]
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19. Embryonic Stem Cell-Derived Endothelial Cells Engraft Into the Ischemic Hindlimb and Restore Perfusion.
  Huang NF, Niiyama H, Peter C, De A, Natkunam Y, Fleissner F, Li Z, Rollins MD, Wu JC, Gambhir SS, Cooke JP.
  Arterioscler Thromb Vasc Biol. 2010 Feb 18. [Epub ahead of print]
  PMID: 20167654 [PubMed - as supplied by publisher]
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20. CHD7 cooperates with PBAF to control multipotent neural crest formation.
  Bajpai R, Chen DA, Rada-Iglesias A, Zhang J, Xiong Y, Helms J, Chang CP, Zhao Y, Swigut T, Wysocka J.
  Nature. 2010 Feb 18;463(7283):958-62. Epub 2010 Feb 3.
  PMID: 20130577 [PubMed - in process]
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21. Single-Molecule Spectroscopy and Imaging of Biomolecules in Living Cells.
  Lord SJ, Lee HL, Moerner WE.
  Anal Chem. 2010 Feb 17. [Epub ahead of print]
  PMID: 20163145 [PubMed - as supplied by publisher]
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22. Site-specific incorporation of p-propargyloxyphenylalanine in a cell-free environment for direct protein-protein click conjugation.
  Bundy BC, Swartz JR.
  Bioconjug Chem. 2010 Feb 17;21(2):255-63.
  PMID: 20099875 [PubMed - in process]
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23. DNA methylation increases nucleosome compaction and rigidity.
  Choy JS, Wei S, Lee JY, Tan S, Chu S, Lee TH.
  J Am Chem Soc. 2010 Feb 17;132(6):1782-3.
  PMID: 20095602 [PubMed - in process]
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24. Polymethylmethacrylate particle exposure causes changes in p38 MAPK and TGF-beta signaling in differentiating MC3T3-E1 cells.
  Ma GK, Chiu R, Huang Z, Pearl J, Ma T, Smith RL, Goodman SB.
  J Biomed Mater Res A. 2010 Feb 17. [Epub ahead of print]
  PMID: 20166219 [PubMed - as supplied by publisher]
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25. A novel role for PIAS proteins in modulating the activity of Zimp7, a novel PIAS-like protein, on the androgen receptor-mediated transcription.
  Peng Y, Lee JT, Zhu C, Sun Z.
  J Biol Chem. 2010 Feb 16. [Epub ahead of print]
  PMID: 20159969 [PubMed - as supplied by publisher]
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26. The interfacial viscoelastic properties and structures of human and animal Meibomian lipids.
  Leiske DL, Raju SR, Ketelson HA, Millar TJ, Fuller GG.
  Exp Eye Res. 2010 Feb 13. [Epub ahead of print]
  PMID: 20156438 [PubMed - as supplied by publisher]
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27. A primary cilia-dependent etiology for midline facial disorders.
  Brugmann SA, Allen NC, James AW, Mekonnen Z, Madan E, Helms JA.
  Hum Mol Genet. 2010 Feb 11. [Epub ahead of print]
  PMID: 20106874 [PubMed - as supplied by publisher]
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28. Very important pharmacogene summary: thiopurine S-methyltransferase.
  Wang L, Pelleymounter L, Weinshilboum R, Johnson JA, Hebert JM, Altman RB, Klein TE.
  Pharmacogenet Genomics. 2010 Feb 11. [Epub ahead of print] No abstract available.
  PMID: 20154640 [PubMed - as supplied by publisher]
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29. Caulobacter PopZ forms a polar subdomain dictating sequential changes in pole composition and function.
  Bowman GR, Comolli LR, Gaietta GM, Fero M, Hong SH, Jones Y, Lee JH, Downing KH, Ellisman MH, McAdams HH, Shapiro L.
  Mol Microbiol. 2010 Feb 10. [Epub ahead of print]
  PMID: 20149103 [PubMed - as supplied by publisher]
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30. KCNH2 pharmacogenomics summary.
  Oshiro C, Thorn CF, Roden DM, Klein TE, Altman RB.
  Pharmacogenet Genomics. 2010 Feb 10. [Epub ahead of print] No abstract available.
  PMID: 20150828 [PubMed - as supplied by publisher]
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31. Quantification of Hemodynamics in Abdominal Aortic Aneurysms During Rest and Exercise Using Magnetic Resonance Imaging and Computational Fluid Dynamics.
  Les AS, Shadden SC, Figueroa CA, Park JM, Tedesco MM, Herfkens RJ, Dalman RL, Taylor CA.
  Ann Biomed Eng. 2010 Feb 9. [Epub ahead of print]
  PMID: 20143263 [PubMed - as supplied by publisher]
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32. Protein-Engineered Biomaterials: Highly Tunable Tissue Engineering Scaffolds.
  Sengupta D, Heilshorn SC.
  Tissue Eng Part B Rev. 2010 Feb 8. [Epub ahead of print]
  PMID: 20141386 [PubMed - as supplied by publisher]
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33. Network-based elucidation of human disease similarities reveals common functional modules enriched for pluripotent drug targets.
  Suthram S, Dudley JT, Chiang AP, Chen R, Hastie TJ, Butte AJ.
  PLoS Comput Biol. 2010 Feb 5;6(2):e1000662.
  PMID: 20140234 [PubMed - in process]
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34. Angiopoietin/Tie2 Signaling Transforms Capillaries into Venules Primed for Leukocyte Trafficking in Airway Inflammation.
  Fuxe J, Lashnits E, O'Brien S, Baluk P, Tabruyn SP, Kuhnert F, Kuo C, Thurston G, McDonald DM.
  Am J Pathol. 2010 Feb 4. [Epub ahead of print]
  PMID: 20133818 [PubMed - as supplied by publisher]
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35. A Dual-Labeled Knottin Peptide for PET and Near-Infrared Fluorescence Imaging of Integrin Expression in Living Subjects.
  Kimura RH, Miao Z, Cheng Z, Gambhir SS, Cochran JR.
  Bioconjug Chem. 2010 Feb 4. [Epub ahead of print]
  PMID: 20131753 [PubMed - as supplied by publisher]
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36. Anomalies Associated With a Prominent Azygos Vein on Echocardiography in the Pediatric Population.
  Punn R, Olson I.
  J Am Soc Echocardiogr. 2010 Feb 4. [Epub ahead of print]
  PMID: 20138465 [PubMed - as supplied by publisher]
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37. IL-17 Contributes to the Development of Chronic Rejection in a Murine Heart Transplant Model.
  Itoh S, Nakae S, Axtell RC, Velotta JB, Kimura N, Kajiwara N, Iwakura Y, Saito H, Adachi H, Steinman L, Robbins RC, Fischbein MP.
  J Clin Immunol. 2010 Feb 4. [Epub ahead of print]
  PMID: 20130970 [PubMed - as supplied by publisher]
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38. Dynamism in gene expression across multiple studies.
  Morgan AA, Dudley JT, Deshpande T, Butte AJ.
  Physiol Genomics. 2010 Feb 4;40(3):128-40. Epub 2009 Nov 17.
  PMID: 19920211 [PubMed - in process]
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39. Retinoic Acid Enhances Osteogenesis in Cranial Suture-Derived Mesenchymal Cells: Potential Mechanisms of Retinoid Induced Craniosynostosis.
  James AW, Levi B, Xu Y, Carre AL, Longaker MT.
  Plast Reconstr Surg. 2010 Feb 3. [Epub ahead of print]
  PMID: 20134361 [PubMed - as supplied by publisher]
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40. Identification of recurring protein structure microenvironments and discovery of novel functional sites around CYS residues.
  Wu S, Liu T, Altman RB.
  BMC Struct Biol. 2010 Feb 2;10(1):4. [Epub ahead of print]
  PMID: 20122268 [PubMed - as supplied by publisher]
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41. The effect of obesity on quality of life in patients with diabetes and coronary artery disease.
  Hlatky MA, Chung SC, Escobedo J, Hillegass WB, Melsop K, Rogers W, Brooks MM; BARI 2D Study Group.
  Am Heart J. 2010 Feb;159(2):292-300.
  PMID: 20152229 [PubMed - indexed for MEDLINE]
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42. Mast cell-derived TNF can exacerbate mortality during severe bacterial infections in C57BL/6-KitW-sh/W-sh mice.
  Piliponsky AM, Chen CC, Grimbaldeston MA, Burns-Guydish SM, Hardy J, Kalesnikoff J, Contag CH, Tsai M, Galli SJ.
  Am J Pathol. 2010 Feb;176(2):926-38. Epub 2009 Dec 24.
  PMID: 20035049 [PubMed - in process]
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43. Increasing Lung Allocation Scores Predict Worsened Survival Among Lung Transplant Recipients.
  Liu V, Zamora MR, Dhillon GS, Weill D.
  Am J Transplant. 2010 Feb 1. [Epub ahead of print]
  PMID: 20121747 [PubMed - as supplied by publisher]
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47. Long-term follow-up of patients with diffuse large B-cell non-Hodgkin's lymphoma receiving purged autografts after induction failure.
  Benjamin JE, Chen GL, Cao TM, Cao PD, Wong RM, Sheehan K, Shizuru JA, Johnston LJ, Negrin RS, Lowsky R, Laport GG.
  Bone Marrow Transplant. 2010 Feb;45(2):303-9. Epub 2009 Jul 13.
  PMID: 19597427 [PubMed - in process]
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48. Guided by the light: visualizing biomolecular processes in living animals with bioluminescence.
  Prescher JA, Contag CH.
  Curr Opin Chem Biol. 2010 Feb;14(1):80-9. Epub 2009 Dec 3.
  PMID: 19962933 [PubMed - in process]
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49. Inflammation in subcutaneous adipose tissue: relationship to adipose cell size.
  McLaughlin T, Deng A, Yee G, Lamendola C, Reaven G, Tsao PS, Cushman SW, Sherman A.
  Diabetologia. 2010 Feb;53(2):369-77. Epub 2009 Oct 9.
  PMID: 19816674 [PubMed - in process]
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50. Effects of mindfulness-based stress reduction (MBSR) on emotion regulation in social anxiety disorder.
  Goldin PR, Gross JJ.
  Emotion. 2010 Feb;10(1):83-91.
  PMID: 20141305 [PubMed - in process]
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51. Ovarian stimulation for fertility preservation in patients with cancer.
  Quintero RB, Helmer A, Huang JQ, Westphal LM.
  Fertil Steril. 2010 Feb;93(3):865-8. Epub 2008 Nov 14.
  PMID: 19013563 [PubMed - in process]
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52. Effect of nuclear localization and hydrodynamic delivery-induced cell division on phiC31 integrase activity.
  Woodard LE, Hillman RT, Keravala A, Lee S, Calos MP.
  Gene Ther. 2010 Feb;17(2):217-26. Epub 2009 Oct 22.
  PMID: 19847205 [PubMed - in process]
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54. Circadian locomotor rhythms are normal in Ts65Dn "down syndrome" mice and unaffected by pentylenetetrazole.
  Ruby NF, Fernandez F, Zhang P, Klima J, Heller HC, Garner CC.
  J Biol Rhythms. 2010 Feb;25(1):63-6.
  PMID: 20075302 [PubMed - in process]
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55. The neural bases of distraction and reappraisal.
  McRae K, Hughes B, Chopra S, Gabrieli JD, Gross JJ, Ochsner KN.
  J Cogn Neurosci. 2010 Feb;22(2):248-62.
  PMID: 19400679 [PubMed - in process]
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56. Quantifying in vivo hemodynamic response to exercise in patients with intermittent claudication and abdominal aortic aneurysms using cine phase-contrast MRI.
  Tenforde AS, Cheng CP, Suh GY, Herfkens RJ, Dalman RL, Taylor CA.
  J Magn Reson Imaging. 2010 Feb;31(2):425-9.
  PMID: 20099356 [PubMed - in process]
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57. Heart transplantation in situs inversus totalis.
  Deuse T, Reitz BA.
  J Thorac Cardiovasc Surg. 2010 Feb;139(2):501-3. Epub 2009 Feb 7. No abstract available.
  PMID: 19660287 [PubMed - indexed for MEDLINE]
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58. Heparin-induced thrombosis without thrombocytopenia.
  Tibayan FA, Leung LL, Burdon TA, Fann JI.
  J Thorac Cardiovasc Surg. 2010 Feb;139(2):e6-7. Epub 2008 Sep 19. No abstract available.
  PMID: 19660256 [PubMed - indexed for MEDLINE]
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59. The effect of aging on deformations of the superficial femoral artery resulting from hip and knee flexion: potential clinical implications.
  Cheng CP, Choi G, Herfkens RJ, Taylor CA.
  J Vasc Interv Radiol. 2010 Feb;21(2):195-202. Epub 2009 Dec 21.
  PMID: 20022767 [PubMed - in process]
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60. A survey of demographics, motivations, and backgrounds among applicants to the integrated 0 + 5 vascular surgery residency.
  Lee JT, Teshome M, de Virgilio C, Ishaque B, Qiu M, Dalman RL.
  J Vasc Surg. 2010 Feb;51(2):496-502; discussion 502-3.
  PMID: 20022205 [PubMed - indexed for MEDLINE]
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61. Induced tolerance to rat liver allografts involves the apoptosis of intragraft T cells and the generation of CD4(+)CD25(+)FoxP3(+) T regulatory cells.
  Fujiki M, Esquivel CO, Martinez OM, Strober S, Uemoto S, Krams SM.
  Liver Transpl. 2010 Feb;16(2):147-54.
  PMID: 20104482 [PubMed - in process]
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62. Positive contrast with alternating repetition time SSFP (PARTS): a fast imaging technique for SPIO-labeled cells.
  Cukur T, Yamada M, Overall WR, Yang P, Nishimura DG.
  Magn Reson Med. 2010 Feb;63(2):427-37.
  PMID: 20099331 [PubMed - in process]
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63. Optical imaging of integrin alphavbeta3 expression with near-infrared fluorescent RGD dimer with tetra(ethylene glycol) linkers.
  Liu Z, Liu S, Niu G, Wang F, Liu S, Chen X.
  Mol Imaging. 2010 Feb;9(1):21-9.
  PMID: 20128995 [PubMed - in process]
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64. Colloidal lenses allow high-temperature single-molecule imaging and improve fluorophore photostability.
  Schwartz JJ, Stavrakis S, Quake SR.
  Nat Nanotechnol. 2010 Feb;5(2):127-32. Epub 2009 Dec 20.
  PMID: 20023643 [PubMed - in process]
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65. Myosin VI: an innovative motor that challenged the swinging lever arm hypothesis.
  Spudich JA, Sivaramakrishnan S.
  Nat Rev Mol Cell Biol. 2010 Feb;11(2):128-37. Review.
  PMID: 20094053 [PubMed - indexed for MEDLINE]
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66. Save the world, prevent obesity: piggybacking on existing social and ideological movements.
  Robinson TN.
  Obesity (Silver Spring). 2010 Feb;18 Suppl 1:S17-22. No abstract available.
  PMID: 20107456 [PubMed - in process]
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67. Photoacoustic ocular imaging.
  de la Zerda A, Paulus YM, Teed R, Bodapati S, Dollberg Y, Khuri-Yakub BT, Blumenkranz MS, Moshfeghi DM, Gambhir SS.
  Opt Lett. 2010 Feb 1;35(3):270-2. doi: 10.1364/OL.35.000270.
  PMID: 20125691 [PubMed - in process]
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68. PharmGKB summary: very important pharmacogene information for angiotensin-converting enzyme.
  Thorn CF, Klein TE, Altman RB.
  Pharmacogenet Genomics. 2010 Feb;20(2):143-6. No abstract available.
  PMID: 19898265 [PubMed - in process]
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69. Human adipose-derived stromal cells respond to and elaborate bone morphogenetic protein-2 during in vitro osteogenic differentiation.
  Panetta NJ, Gupta DM, Lee JK, Wan DC, Commons GW, Longaker MT.
  Plast Reconstr Surg. 2010 Feb;125(2):483-93.
  PMID: 20124834 [PubMed - indexed for MEDLINE]
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70. Persistent donor cell gene expression among human induced pluripotent stem cells contributes to differences with human embryonic stem cells.
  Ghosh Z, Wilson KD, Wu Y, Hu S, Quertermous T, Wu JC.
  PLoS One. 2010 Feb 1;5(2):e8975.
  PMID: 20126639 [PubMed - in process]
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71. Noninvasive assessment of tumor VEGF receptors in response to treatment with pazopanib: a molecular imaging study.
  Blankenberg FG, Levashova Z, Sarkar SK, Pizzonia J, Backer MV, Backer JM.
  Transl Oncol. 2010 Feb;3(1):56-64.
  PMID: 20165696 [PubMed - in process]
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73. Chronic exposure to nicotine impairs cholinergic angiogenesis.
  Konishi H, Wu J, Cooke JP.
  Vasc Med. 2010 Feb;15(1):47-54. Epub 2009 Sep 24.
  PMID: 19778953 [PubMed - in process]
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