CVI Member Publications

August 2010

CVI members had 60 publications in August 2010:

1. Case report: a thrombus in the venous reservoir while using bivalirudin in a patient with heparin-induced thrombocytopenia undergoing heart transplantation.
  Wong JK, Tian Y, Shuttleworth P, Caffarelli AD, Reitz BA, Mora-Mangano CT.
  Anesth Analg. 2010 Sep;111(3):609-12. Epub 2010 Aug 4.
  PMID: 20686010 [PubMed - in process]
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2. An imprinted signature helps isolate ESC-equivalent iPSCs.
  Lujan E, Wernig M.
  Cell Res. 2010 Sep;20(9):974-6. Epub 2010 Aug 10. No abstract available.
  PMID: 20697429 [PubMed - in process]
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3. Development of new hepaticoenteric collateral pathways after hepatic arterial skeletonization in preparation for yttrium-90 radioembolization.
  Abdelmaksoud MH, Hwang GL, Louie JD, Kothary N, Hofmann LV, Kuo WT, Hovsepian DM, Sze DY.
  J Vasc Interv Radiol. 2010 Sep;21(9):1385-95. Epub 2010 Aug 4.
  PMID: 20688531 [PubMed - in process]
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4. INTERMACS Defined Morbidity and Mortality Associated with Pediatric VAD Support at a Single US Center: Stanford Experience.
  Stein ML, Robbins R, Sabati AA, Reinhartz O, Chin C, Liu E, Bernstein D, Roth S, Wright G, Reitz B, Rosenthal D.
  Circ Heart Fail. 2010 Aug 31. [Epub ahead of print]
  PMID: 20807863 [PubMed - as supplied by publisher]
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5. Day 2 versus day 3 embryo transfer in poor responders: a prospective randomized trial.
  Shahine LK, Milki AA, Westphal LM, Baker VL, Behr B, Lathi RB.
  Fertil Steril. 2010 Aug 31. [Epub ahead of print]
  PMID: 20813357 [PubMed - as supplied by publisher]
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6. SLC19A1 pharmacogenomics summary.
  Yee SW, Gong L, Badagnani I, Giacomini KM, Klein TE, Altman RB.
  Pharmacogenet Genomics. 2010 Aug 31. [Epub ahead of print] No abstract available.
  PMID: 20811316 [PubMed - as supplied by publisher]
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7. Elastic Properties of Induced Pluripotent Stem Cells.
  Hammerick KE, Huang Z, Sun N, Lam MT, Prinz FB, Wu JC, Commons GW, Longaker M.
  Tissue Eng Part A. 2010 Aug 31. [Epub ahead of print]
  PMID: 20807017 [PubMed - as supplied by publisher]
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8. Technique for Targeting Arteriovenous Malformations Using Frameless Image-Guided Robotic Radiosurgery.
  Hristov D, Liu L, Adler JR, Gibbs IC, Moore T, Sarmiento M, Chang SD, Dodd R, Marks M, Do HM.
  Int J Radiat Oncol Biol Phys. 2010 Aug 27. [Epub ahead of print]
  PMID: 20801584 [PubMed - as supplied by publisher]
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9. Action of the chaperonin GroEL/ES on a non-native substrate observed with single-molecule FRET.
  Kim SY, Miller EJ, Frydman J, Moerner WE.
  J Mol Biol. 2010 Aug 27;401(4):553-63. Epub 2010 Jun 30.
  PMID: 20600107 [PubMed - indexed for MEDLINE]
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10. Informatics in Radiology: RADTF: A Semantic Search-enabled, Natural Language Processor-generated Radiology Teaching File.
  Do BH, Wu A, Biswal S, Kamaya A, Rubin DL.
  Radiographics. 2010 Aug 26. [Epub ahead of print]
  PMID: 20801868 [PubMed - as supplied by publisher]
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11. {alpha}-arrestins Aly1 and Aly2 Regulate Intracellular Trafficking in Response to Nutrient Signaling.
  O'Donnell AF, Apffel A, Gardner RG, Cyert MS.
  Mol Biol Cell. 2010 Aug 25. [Epub ahead of print]
  PMID: 20739461 [PubMed - as supplied by publisher] Free Article
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12. PharmGKB summary: cytochrome P450, family 2, subfamily J, polypeptide 2: CYP2J2.
  Berlin DS, Sangkuhl K, Klein TE, Altman RB.
  Pharmacogenet Genomics. 2010 Aug 25. [Epub ahead of print] No abstract available.
  PMID: 20739908 [PubMed - as supplied by publisher]
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13. Relationship Between Arterial and Fibrous Cap Remodeling: A Serial Three-Vessel Intravascular Ultrasound and Optical Coherence Tomography Study.
  Yamada R, Okura H, Kume T, Saito K, Miyamoto Y, Imai K, Tsuchiya T, Maehama T, Okahashi N, Obase K, Hayashida A, Neishi Y, Kawamoto T, Yoshida K.
  Circ Cardiovasc Interv. 2010 Aug 24. [Epub ahead of print]
  PMID: 20736445 [PubMed - as supplied by publisher]
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14. Dynamic MicroRNA Expression Programs during Cardiac Differentiation of Human Embryonic Stem Cells: Role for miR-499.
  Wilson KD, Hu S, Venkatasubrahmanyam S, Fu JD, Sun N, Abilez OJ, Baugh JJ, Jia F, Ghosh Z, Li RA, Butte AJ, Wu JC.
  Circ Cardiovasc Genet. 2010 Aug 23. [Epub ahead of print]
  PMID: 20733065 [PubMed - as supplied by publisher]
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15. PharmGKB summary: dopamine receptor D2.
  Mi H, Thomas PD, Ring HZ, Jiang R, Sangkuhl K, Klein TE, Altman RB.
  Pharmacogenet Genomics. 2010 Aug 23. [Epub ahead of print] No abstract available.
  PMID: 20736885 [PubMed - as supplied by publisher]
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16. High Speed Water Sterilization Using One-Dimensional Nanostructures.
  Schoen DT, Schoen AP, Hu L, Kim HS, Heilshorn SC, Cui Y.
  Nano Lett. 2010 Aug 20. [Epub ahead of print]
  PMID: 20726518 [PubMed - as supplied by publisher]
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17. Design, synthesis, and imaging of an activatable photoacoustic probe.
  Levi J, Kothapalli SR, Ma TJ, Hartman K, Khuri-Yakub BT, Gambhir SS.
  J Am Chem Soc. 2010 Aug 18;132(32):11264-9.
  PMID: 20698693 [PubMed - in process]
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18. Effects of Exercise Training in Patients With Abdominal Aortic Aneurysm: PRELIMINARY RESULTS FROM A RANDOMIZED TRIAL.
  Myers JN, White JJ, Narasimhan B, Dalman RL.
  J Cardiopulm Rehabil Prev. 2010 Aug 18. [Epub ahead of print]
  PMID: 20724934 [PubMed - as supplied by publisher]
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19. Aortic and Mitral Valve Stenosis with Regurgitation: Not Due to Rheumatic Heart Disease.
  Talluto CJ, Silverman NH.
  Echocardiography. 2010 Aug 17. [Epub ahead of print]
  PMID: 20718842 [PubMed - as supplied by publisher]
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20. Using text to build semantic networks for pharmacogenomics.
  Coulet A, Shah N, Garten Y, Musen M, Altman RB.
  J Biomed Inform. 2010 Aug 17. [Epub ahead of print]
  PMID: 20723615 [PubMed - as supplied by publisher]
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21. VKORC1 Pharmacogenomics Summary.
  Owen RP, Gong L, Sagreiya H, Klein TE, Altman RB.
  Pharmacogenet Genomics. 2010 Aug 17. [Epub ahead of print] No abstract available.
  PMID: 19940803 [PubMed - as supplied by publisher]
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22. Extreme Evolutionary Disparities Seen in Positive Selection across Seven Complex Diseases.
  Corona E, Dudley JT, Butte AJ.
  PLoS One. 2010 Aug 17;5(8). pii: e12236.
  PMID: 20808933 [PubMed - in process] Free Article
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23. Allogeneic T cells impair engraftment and hematopoiesis after stem cell transplantation.
  Müller AM, Linderman JA, Florek M, Miklos D, Shizuru JA.
  Proc Natl Acad Sci U S A. 2010 Aug 17;107(33):14721-6. Epub 2010 Aug 2.
  PMID: 20679222 [PubMed - in process]
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24. Noninvasive molecular imaging of c-Myc activation in living mice.
  Fan-Minogue H, Cao Z, Paulmurugan R, Chan CT, Massoud TF, Felsher DW, Gambhir SS.
  Proc Natl Acad Sci U S A. 2010 Aug 16. [Epub ahead of print]
  PMID: 20713710 [PubMed - as supplied by publisher]
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25. Comparison of everolimus- versus paclitaxel-eluting stents implanted in patients with diabetes mellitus as evaluated by three-dimensional intravascular ultrasound analysis.
  Otake H, Ako J, Yamasaki M, Tsujino I, Shimohama T, Hasegawa T, Sakurai R, Waseda K, Honda Y, Sood P, Sudhir K, Stone GW, Fitzgerald PJ.
  Am J Cardiol. 2010 Aug 15;106(4):492-7.
  PMID: 20691306 [PubMed - in process]
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26. Microfluidic platforms for single-cell analysis.
  Zare RN, Kim S.
  Annu Rev Biomed Eng. 2010 Aug 15;12:187-201.
  PMID: 20433347 [PubMed - in process]
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27. Differential activation of canonical Wnt signaling determines cranial sutures fate: a novel mechanism for sagittal suture craniosynostosis.
  Behr B, Longaker MT, Quarto N.
  Dev Biol. 2010 Aug 15;344(2):922-40. Epub 2010 Jun 12.
  PMID: 20547147 [PubMed - indexed for MEDLINE]
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28. Lung Cancer Among Postmenopausal Women Treated With Estrogen Alone in the Women's Health Initiative Randomized Trial.
  Chlebowski RT, Anderson GL, Manson JE, Schwartz AG, Wakelee H, Gass M, Rodabough RJ, Johnson KC, Wactawski-Wende J, Kotchen JM, Ockene JK, O'Sullivan MJ, Hubbell FA, Chien JW, Chen C, Stefanick ML.
  J Natl Cancer Inst. 2010 Aug 13. [Epub ahead of print]
  PMID: 20709992 [PubMed - as supplied by publisher]
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29. Human Adipose-Derived Stromal Cells Stimulate Autogenous Skeletal Repair via Paracrine Hedgehog Signaling with Calvarial Osteoblasts.
  Levi B, James AW, Nelson ER, Li S, Peng M, Commons G, Lee M, Wu B, Longaker MT.
  Stem Cells Dev. 2010 Aug 10. [Epub ahead of print]
  PMID: 20698749 [PubMed - as supplied by publisher]
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30. A multiscale model for eccentric and concentric cardiac growth through sarcomerogenesis.
  Göktepe S, Abilez OJ, Parker KK, Kuhl E.
  J Theor Biol. 2010 Aug 7;265(3):433-42. Epub 2010 May 4.
  PMID: 20447409 [PubMed - in process]
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31. Transient inactivation of Rb and ARF yields regenerative cells from postmitotic mammalian muscle.
  Pajcini KV, Corbel SY, Sage J, Pomerantz JH,Blau HM.
  Cell Stem Cell. 2010 Aug 6;7(2):198-213.
  PMID: 20682446 [PubMed - in process]
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32. Differential DNA damage response in stem and progenitor cells.
  Seita J, Rossi DJ, Weissman IL.
  Cell Stem Cell. 2010 Aug 6;7(2):145-7.
  PMID: 20682442 [PubMed - in process]
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33. Translational bioinformatics in the cloud: an affordable alternative.
  Dudley JT, Pouliot Y, Chen R, Morgan AA, Butte AJ.
  Genome Med. 2010 Aug 6;2(8):51. [Epub ahead of print]
  PMID: 20691073 [PubMed - as supplied by publisher]
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34. Survival after extreme left atrial hypertension and pulmonary hemorrhage in an infant supported with extracorporeal membrane oxygenation for refractory atrial flutter.
  Cisco MJ, Asija R, Dubin AM, Perry SB, Hanley FL, Roth SJ.
  Pediatr Crit Care Med. 2010 Aug 5. [Epub ahead of print]
  PMID: 20693934 [PubMed - as supplied by publisher]
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35. Mechanical Fatigue of Hybrid Glasses.
  Oliver MS, Dauskardt RH.
  Small. 2010 Aug 5. [Epub ahead of print] No abstract available.
  PMID: 20690136 [PubMed - as supplied by publisher]
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36. Short- and Mid-Term Intravascular Ultrasound Analysis of the New Zotarolimus-Eluting Stent With Durable Polymer.
  Waseda K, Ako J, Yamasaki M, Koizumi T, Ormiston J, Worthley SG, Whitbourn RJ, Walters DL, Honda Y, Meredith IT, Fitzgerald PJ; The RESOLUTE Trial Investigators.
  Circ J. 2010 Aug 3. [Epub ahead of print]
  PMID: 20689221 [PubMed - as supplied by publisher] Free Article
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37. Stem cell therapy for vascular regeneration: adult, embryonic, and induced pluripotent stem cells.
  Leeper NJ, Hunter AL, Cooke JP.
  Circulation. 2010 Aug 3;122(5):517-26. No abstract available.
  PMID: 20679581 [PubMed - in process]
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38. Micronutrient quality of weight-loss diets that focus on macronutrients: results from the A TO Z study.
  Gardner CD, Kim S, Bersamin A, Dopler-Nelson M, Otten J, Oelrich B, Cherin R.
  Am J Clin Nutr. 2010 Aug;92(2):304-12. Epub 2010 Jun 23.
  PMID: 20573800 [PubMed - indexed for MEDLINE]
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39. Tuning multidomain hemodynamic simulations to match physiological measurements.
  Spilker RL, Taylor CA.
  Ann Biomed Eng. 2010 Aug;38(8):2635-48. Epub 2010 Mar 30.
  PMID: 20352338 [PubMed - in process]
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40. Phase I/II trial of GN-BVC, a gemcitabine and vinorelbine-containing conditioning regimen for autologous hematopoietic cell transplantation in recurrent and refractory hodgkin lymphoma.
  Arai S, Letsinger R, Wong RM, Johnston LJ, Laport GG, Lowsky R, Miklos DB, Shizuru JA, Weng WK, Lavori PW, Blume KG, Negrin RS, Horning SJ.
  Biol Blood Marrow Transplant. 2010 Aug;16(8):1145-54. Epub 2010 Mar 1.
  PMID: 20197102 [PubMed - in process]
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41. Metabolic dysfunction in women with bipolar disorder: the potential influence of family history of type 2 diabetes mellitus.
  Rasgon NL, Kenna HA, Reynolds-May MF, Stemmle PG, Vemuri M, Marsh W, Wang P, Ketter TA.
  Bipolar Disord. 2010 Aug;12(5):504-13.
  PMID: 20712751 [PubMed - in process]
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42. Different endogenous threshold levels of Fibroblast Growth Factor-ligands determine the healing potential of frontal and parietal bones.
  Behr B, Panetta NJ, Longaker MT, Quarto N.
  Bone. 2010 Aug;47(2):281-94. Epub 2010 May 21.
  PMID: 20472108 [PubMed - in process]
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43. Analysis of the size distributions of fetal and maternal cell-free DNA by paired-end sequencing.
  Fan HC, Blumenfeld YJ, Chitkara U, Hudgins L, Quake SR.
  Clin Chem. 2010 Aug;56(8):1279-86. Epub 2010 Jun 17.
  PMID: 20558635 [PubMed - indexed for MEDLINE]
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44. Regulation of human Th9 differentiation by type I interferons and IL-21.
  Wong MT, Ye JJ, Alonso MN, Landrigan A, Cheung RK, Engleman E, Utz PJ.
  Immunol Cell Biol. 2010 Aug;88(6):624-31. Epub 2010 Apr 27.
  PMID: 20421880 [PubMed - in process]
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45. Application of substrate curvature method to differentiate drying stresses in topical coatings and human stratum corneum.
  Levi K, Dauskardt RH.
  Int J Cosmet Sci. 2010 Aug;32(4):294-8. Epub 2010 Apr 1.
  PMID: 20384900 [PubMed - in process]
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46. Drying stress and damage processes in human stratum corneum.
  Levi K, Weber RJ, Do JQ, Dauskardt RH.
  Int J Cosmet Sci. 2010 Aug;32(4):276-93. Epub 2009 Nov 3.
  PMID: 19889042 [PubMed - in process]
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47. Institutional experience with laparoscopic partial splenectomy for hereditary spherocytosis.
  Slater BJ, Chan FP, Davis K, Dutta S.
  J Pediatr Surg. 2010 Aug;45(8):1682-6.
  PMID: 20713220 [PubMed - in process]
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48. Length of stay predictions: improvements through the use of automated laboratory and comorbidity variables.
  Liu V, Kipnis P, Gould MK, Escobar GJ.
  Med Care. 2010 Aug;48(8):739-44.
  PMID: 20613662 [PubMed - indexed for MEDLINE]
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49. Etching and narrowing of graphene from the edges.
  Wang X, Dai H.
  Nat Chem. 2010 Aug;2(8):661-5. Epub 2010 Jun 27.
  PMID: 20651729 [PubMed - indexed for MEDLINE]
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50. Detection of splice junctions from paired-end RNA-seq data by SpliceMap.
  Au KF, Jiang H, Lin L, Xing Y, Wong WH.
  Nucleic Acids Res. 2010 Aug;38(14):4570-8. Epub 2010 Apr 5.
  PMID: 20371516 [PubMed - in process] Free PMC Article Free text
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51. Glucose-stimulated insulin secretion in gastric bypass patients with hypoglycemic syndrome: no evidence for inappropriate pancreatic beta-cell function.
  Kim SH, Abbasi F, Lamendola C, Reaven GM, McLaughlin T.
  Obes Surg. 2010 Aug;20(8):1110-6.
  PMID: 20665189 [PubMed - in process]
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52. PharmGKB summary: very important pharmacogene information for CYP2B6.
  Thorn CF, Lamba JK, Lamba V, Klein TE, Altman RB.
  Pharmacogenet Genomics. 2010 Aug;20(8):520-3. No abstract available.
  PMID: 20648701 [PubMed - in process]
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53. Divergent modulation of adipose-derived stromal cell differentiation by TGF-beta1 based on species of derivation.
  Levi B, James AW, Xu Y, Commons GW, Longaker MT.
  Plast Reconstr Surg. 2010 Aug;126(2):412-25.
  PMID: 20679827 [PubMed - in process]
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54. Improved pediatric MR imaging with compressed sensing.
  Vasanawala SS, Alley MT, Hargreaves BA, Barth RA, Pauly JM, Lustig M.
  Radiology. 2010 Aug;256(2):607-16. Epub 2010 Jun 7.
  PMID: 20529991 [PubMed - in process]
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55. Antiangiogenic cancer therapy: monitoring with molecular US and a clinically translatable contrast agent (BR55).
  Pysz MA, Foygel K, Rosenberg J, Gambhir SS, Schneider M, Willmann JK.
  Radiology. 2010 Aug;256(2):519-27. Epub 2010 Jun 1.
  PMID: 20515975 [PubMed - in process]
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56. Post-exercise heart rate recovery in individuals with spinal cord injury.
  Myers JN, Hsu L, Hadley D, Lee MY, Kiratli BJ.
  Spinal Cord. 2010 Aug;48(8):639-44. Epub 2010 Feb 2.
  PMID: 20125108 [PubMed - in process]
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57. Hyperglycemia modulates plasminogen activator inhibitor-1 expression and aortic diameter in experimental aortic aneurysm disease.
  Dua MM, Miyama N, Azuma J, Schultz GM, Sho M, Morser J, Dalman RL.
  Surgery. 2010 Aug;148(2):429-35. Epub 2010 Jun 19.
  PMID: 20561659 [PubMed - indexed for MEDLINE]
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58. Evidence-Based Suggestions for Management of Air Leaks.
  Merritt RE, Singhal S, Shrager JB.
  Thorac Surg Clin. 2010 Aug;20(3):435-448.
  PMID: 20619236 [PubMed - as supplied by publisher]
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59. Sonic Hedgehog influences the balance of osteogenesis and adipogenesis in mouse adipose-derived stromal cells.
  James AW, Leucht P, Levi B, Carre AL, Xu Y, Helms JA, Longaker MT.
  Tissue Eng Part A. 2010 Aug;16(8):2605-16.
  PMID: 20367246 [PubMed - in process]
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60. Asymmetric dimethylarginine correlates with measures of disease severity, major adverse cardiovascular events and all-cause mortality in patients with peripheral arterial disease.
  Wilson AM, Shin DS, Weatherby C, Harada RK, Ng MK, Nair N, Kielstein J, Cooke JP.
  Vasc Med. 2010 Aug;15(4):267-74. Epub 2010 May 19.
  PMID: 20484311 [PubMed - in process]
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